Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015796594.1_cds_XP_016450298.1_4404
CDS Infomation

[gene=LOC107775127] [db_xref=GeneID:107775127] [protein=rop guanine nucleotide exchange factor 12-like] [protein_id=XP_016450298.1] [location=join(43508..43823,44326..44442,44739..44893,45173..45247,45335..45595,45698..46018,46454..46864)] [gbkey=CDS]
Sequence

ATGGTTCGAGCAGCACTTGAGGAAGCGAAAGAAATGTGCAAGGCTAAATTACTGCATTTC
AAAGGAAAGTCAGAGGATGGAACAGGACAGGAAACGCGAAGTATGATTCTTGAGATTAAT
AATAGTGATTCATCAATATTGACTTCAGGGGATGAAAGGGTAACGTCGAAAAGTGAAGCT
TCAATGCCTTTACATGATCAACCTGTTGAATTTCAAAGGATTGGGTGTGTCCTTAGTCGT
ACTGAGTCTATCAAATCACGTTTGGCTAATGATCCTGGTGTCCCTAGCCCTCGCCCTAGA
CAGACCCAGCCTTCAGATATGGAGCTGATGAAGGAAAAGTTTTCAAAGTTGCTGCTTGGC
GAGGACATGTCCGGTGGAGGAAAGGGTGTGTCATCTGCACTGGCATTGTCTAATGCAATC
ACAAACCTAGCAGCTTCTGCTTTTGGGGAACAGAAGAGATTAGAGCCTATGCCATCTGAG
AGAAAAGCCAAATGGAGAAAAGAAATTGACTGGCTGTTATCTGTAACAGATCACATTGTT
GAATTTGTTCCTTCTAAACAAAAATCAAAAGATGGAACAAGTATGGAGGTTATGGTGACA
AAGCAGAGAACCGATCTTCAAATGAATATTCCAGCATTACGCAAGCTAGACGCTATGCTT
CTTGATTGCTTAGATAACTTTAAAGACCAAAACGAGTTCTCCTATATATCGAAGGATGAC
GAATCACAGGAAGGGAGGAAAGATGATAAATGGTGGATACCGACTCCTAAGGTTCCTCTA
AATGGCTTGTCCGATGTTACAAGAAAATGGCTGCAATTTCAGAAGGATTCAGTAAACCAA
GTACTTAAAGCAGCCATGGCTATAAATGCTCAAGTCCTATCGGAAATGGAGATCCCTGAA
AGTTATATAGACTCACTACCCAAGAATGGGAGAGCAAGTCTTGGAGATGCGATCTATAAG
AGCATCACTGATGAATACTTTGATCCTGACTACTTCCTCACAACTATGGACTTGTCTTCA
GAACATAAGATTTTAGACCTCAAGAACAAACTTGAGGCTTCTGTAATTATTTGGAGACGA
AAGATGACTTCTAAAGATGGGAAGTCAGCATGGGGTTCCGCCGTTAGTTTAGAGAAGAGA
GAAATCTTTGAAGAAAGAGCAGAGACTATCTTGCTTATTCTTAAGCAGAGGTTCCCTGGA
ATTCCTCAGTCATCTCTAGACATTAGCAAAATCCAATTCAATGGGGATGTGGGGCAAGCT
ATTTTAGAAAGCTATTCAAGAATAATAGAGAGCAGGGCACACACAGTCATGTCAAGGATT
GAAGATGTTCTCCAAGCAGATGCTACGGCCCAAAATCCTTCGAGTGCTGAAGTAAAGAGG
TTTCCTCTAAGAGATTCATTACGCGTATGTCCATCAGGCAGATTCCCAAATGCCAAGGAA
GAAGTAGAAAAGCTTAACTCTGTGGAGAATCCAACGTCAATGACACTGTTGGATTTCATG
GGTTGGACAGTGGAACAAGGAGAGAATGACGCAAAGAAAGATTTGAAGGAGGAGTTAGAC
ATTGATGCGAAGAAACCACCTAACATAGTCACAAACAAGAAAAGTTCTTACTTAGAGAAC
TTAGTTGGTTCTAGAAGTCCCACAGCACGCCACTAA

Peptide Sequence

PEP ID

XP_016450298.1
PEP Infomation

PREDICTED: rop guanine nucleotide exchange factor 12-like [Nicotiana tabacum]
Sequence

MVRAALEEAKEMCKAKLLHFKGKSEDGTGQETRSMILEINNSDSSILTSGDERVTSKSEA
SMPLHDQPVEFQRIGCVLSRTESIKSRLANDPGVPSPRPRQTQPSDMELMKEKFSKLLLG
EDMSGGGKGVSSALALSNAITNLAASAFGEQKRLEPMPSERKAKWRKEIDWLLSVTDHIV
EFVPSKQKSKDGTSMEVMVTKQRTDLQMNIPALRKLDAMLLDCLDNFKDQNEFSYISKDD
ESQEGRKDDKWWIPTPKVPLNGLSDVTRKWLQFQKDSVNQVLKAAMAINAQVLSEMEIPE
SYIDSLPKNGRASLGDAIYKSITDEYFDPDYFLTTMDLSSEHKILDLKNKLEASVIIWRR
KMTSKDGKSAWGSAVSLEKREIFEERAETILLILKQRFPGIPQSSLDISKIQFNGDVGQA
ILESYSRIIESRAHTVMSRIEDVLQADATAQNPSSAEVKRFPLRDSLRVCPSGRFPNAKE
EVEKLNSVENPTSMTLLDFMGWTVEQGENDAKKDLKEELDIDAKKPPNIVTNKKSSYLEN
LVGSRSPTARH

Transcript Sequence

Gene sequence data has not been registered.